Category: People

People
BioEng Lab & ÄIO International Picnic

Before the academic year begins and summer loses its warmth, the BioEng Lab and ÄIO teams decided to have a common lunch in the format of an international picnic. Everyone was invited to bring something representing their country’s cuisine or culture. The table soon filled up with a variety of savoury dishes, sweet cakes and snacks, offering plenty of opportunities to discover something new. 

The biggest surprise of the event, however, was the grill that appeared from the ÄIO’s storage room. Soon, the smell of meat in a Brazilian marinade was filling the Tehnopol air, making it rather difficult to remember that this was supposed to be just a lunch break. 

Instead, it turned into a relaxed afternoon with good food, conversations and plenty of fun — a simple reminder that collaboration can also happen away from desks, meetings and laboratories. 

The same activity next year? 

EventPeople
Summer Day 2026

What´s the better way to enjoy Estonia’s beautiful nature than to escape to one of its islands for a day? This year, the BioEng team decided to explore Aegna island — a place that might surprise you with one interesting fact: although it feels like a remote island getaway, Aegna is actually part of the city of Tallinn! 

Our adventure began on the 17th of July at Tallinn’s Linnahall harbor, where we boarded the ferry. The ferry, which can accommodate around 100 passengers, was packed, with every ticket sold. Most of the passengers were Estonians, which seemed to be a great example of how popular domestic tourism is among locals. 

On the island, our guide was waiting to welcome us, and our adventure began. Our first stops took us into the island’s fascinating history. We explored several places, including the Officers’ Casino and the remains of Peter the Great’s Naval Fortress — more specifically, the “Heavy Batteries of the Tallinn–Porkkala Line”. Walking among these remnants of the past, it was easy to imagine how strategically important this seemingly peaceful island once was. 

After exploring the historical sites, we made our way towards the beach. We found a perfect spot in the shade of the trees and settled down for a picnic. Some brave members of the team dipped their toes into the sea, but despite it being summer, the water was surprisingly ice-cold! 

With renewed energy after lunch, we headed towards one of Aegna’s most mysterious attractions — its magical stone labyrinth. The 11-turn stone labyrinth, also known as “Jerusalem”, is an important part of Aegna’s cultural heritage. Throughout history, labyrinths have been associated with rituals, mystery, and spiritual journeys. This one is said to have been regarded as a ritual sanctuary and a place for connecting with supernatural forces. One of the BioEng members even completed the entire labyrinth — but whether it really has a magical effect remains a secret. 

Our next destination was the impressive Tulekivi boulder. In the past, a fire was lit on top of it to serve as a navigational signal for ships approaching the island. On this day, however, the boulder had a different purpose — it was conquered by the BioEng team! The climb up was surprisingly easy, although getting back down proved to be a little more complicated. 

Our adventure continued with a visit to a boulder field before we followed a magical trail marked by a continuous line of stones. Here, we discovered another fascinating island tradition: everyone who walks the trail is encouraged to pick up a stone from the shore and add it to the markings along the path, making the trail a little longer for the next visitors. In this way, every person who visits becomes a small part of the island’s story. 

Eventually, following the trail, we made our way back to the port. Before boarding the ferry, there was, of course, one final and essential stop: the ice-cream kiosk! As the ferry carried us back towards Tallinn, we could look back on a day filled with sunshine, history, nature, adventure and plenty of laughter. But the day was not over yet. Back in Tallinn, we continued our summer adventure with a delicious Georgian meal. 

And so, with tired legs, happy faces and plenty of new memories, we brought our amazing BioEng Summer Day to an end.

 

(Thank you Adventurehiking OÜ for an amazing guide Jaan Jalas)

NetworkingPeopleProjects
Mid-term Meeting and Workshop by YAF (Yeast-based Solutions for Sustainable Aviation Fuels)

Abdullah Nasir, Subhasis Behera and Laura de Freitas Naves from our BioEng research group recently participated in the two events by YAF (Yeast-based Solutions for Sustainable Aviation Fuels) project.

Mid-term Meeting 

Meeting held at CIEMAT, and coordinated by IMDEA Energía Energy, in Madrid. 

During the meeting, each Doctoral Candidate presented the main achievements and activities developed within their Individual Research Projects since the last meeting, showcasing the excellent progress being made across the programme. These sessions provided valuable discussions, feedback, and new perspectives, reinforcing the collaborative spirit of the project.  

Biorefinery for Biofuels & Chemicals Training 

The training was held in Turku, Finland. The three-day training provided an in-depth overview of modern biorefinery concepts and sustainable biomass valorization, covering topics such as lignocellulosic biomass processing, thermochemical conversion technologies, algae-based biorefineries, bioactive compounds, and industrial case studies from pilot-scale biorefineries.  

The workshop fostered interdisciplinary learning and collaboration while strengthening expertise in circular bioeconomy and sustainable production of biofuels and biochemicals.

 

 

 

 

 

 

 

 

Open positions
New PhD postion is opened in collaboration with TFTAK!
Open PhD Position in Enzyme Engineering 🔬
📍 TalTech Bioengineering Lab x TFTAK | Tallinn, Estonia
We’re excited to announce a PhD position in Enzyme Engineering focused on a systematic approach toward high-level protein production in yeast.
This is a collaborative project between the Bioengineering Lab at TalTech and TFTAK, combining cutting-edge research in strain engineering and enzyme design.
What we’re looking for:
If you’re interested in:
✅ High-throughput strain engineering
✅ Synthetic biology & enzyme design
✅ Scalable protein production in yeast
…then this could be the opportunity for you!
📅 Starting date: September, 2025
application deadline: June 30th 2025 23:59 EET

The Food Tech and Bioengineering laboratory at Tallinn University of Technology (TalTech) is focused on developing sustainable solutions in the bioeconomy sector. Led by Professor Petri-Jaan Lahtvee, the lab specializes in bioinformatics, metabolic engineering, and bioprocess optimization. Research efforts are directed towards creating microbial cell factories to convert waste materials into valuable products, with a focus on biosustainability and the sustainable production of food, feed, bio-chemicals, and materials.

TFTAK (Center of Food and Fermentation Technologies) is a leading Estonian R&D center specializing in innovative solutions for the food, biotech, and fermentation industries. Its fermentation competencies cover from strain development and metabolic engineering to precision fermentation and process scale-up. Dr. Steven van der Hoek’s group develops synthetic biology tools and strain engineering capabilities, focusing on precision fermentation for alternative protein production, combining systems biology, bioprocess engineering, and high-throughput screening.

Role Description

This is a full-time on-site Doctoral Researcher role shared between Bioengineering and Food laboratory in Tallinn University of Technology and TFTAK. The doctoral researcher will be involved in tool development for reliable protein production pipeline from concept to gram scale. Duties will include participating in the Design-Build-Test-Learn cycle of cell factory design and process development, as well as collaborating on projects for creating microbial cell factories.

Qualifications

  • Research experience in bioinformatics, metabolic engineering, or bioprocess optimization
  • Strong analytical and problem-solving skills
  • English at least B2 level
  • Ability to work in a collaborative multicultural research environment
  • Excellent communication and presentation skills
  • Master’s degree in life sciences
  • Master´s degree in bioengineering, bioinformatics, or related field is a plus
  • Experience in programming in Phyton and omics data analysis is a plus
  • Experience with cell factory design and optimization is a plus
  • Estonian language is a plus
  • Foreign applicants must have a valid Estonian residence permit or right of residence and a permanent legal income in accordance with the provisions of the Aliens Act.

What we offer

  • A fully funded 4-year PhD position starting in September 2025
  • Gross monthly salary starting from 2300 €
  • 35 calendar days of paid vacation yearly
  • Additional benefits including paid sick leave and health insurance
  • Flexible working hours and supportive supervision
  • Access to state-of-the-art laboratory facilities and high-throughput platforms
  • Opportunity to work in a dynamic, interdisciplinary environment bridging academia and industry
  • International research collaboration and opportunities for mobility
  • Personal and professional development through conferences, courses, and workshops
  • The chance to contribute to meaningful innovation in sustainability and synthetic biology

Applying

For more info and applying please submit your CV and documents via: https://taltech.glowbase.com/positions/977

More info about applying for a PhD position in Tallinn University of Technology can be found at https://taltech.ee/en/phd-admission

 

People
Kristin´s exchange semester at DTU

Kristin Antoi, 22-years old, 1st year MSc student in Applied Chemistry and Biotechnology who is working in Bioengineering laboratory, spent an exchange semester in Danish University of Technology (DTU), Denmark.

Kristin explained that there has been a lot of talk about opportunities to go abroad with Erasmus. She wanted to go somewhere where she could learn different subjects and supplement knowledge from TalTech and found DTU as a prospective option. “I mainly took subjects related to medicine, such as Vaccine technology, Molecular biology and diagnostics and Eukaryotic biology. One course was also about start-up entrepreneurship in food innovation, where I was involved in two ideas. We developed business models for a smoothie powder made with fruits that are about to be discarded. The other idea focused on puddings made for cancer patients who have lost their sense of taste due to radiation treatment,” explained Kristin.

Kristin spent one semester at DTU and described that the beginning was effortless since most deadlines approach towards the end of the semester. She added that one difference with Estonian subjects is that the classes did not have any practical part. There were specific practical subjects called projects but they needed to be declared separately, and unfortunately the one she was interested in, got full quickly. She, however, turned her hand to practice while working for a research group that developed microchips for medical applications. “My work entailed filling the microchips with a solution and checking their quality under microscope,” elaborated Kristin.

About life in Denmark in general, she pointed out that there are many more job offers in the biotech industry there, as the industry is already established. “The Danes have a strict work-life balance. The workdays tend to be shorter and they also leave as soon as the clock strikes. Moreover, they have a lot of public holidays, for example two additional holidays between 1st of June and Midsummer.”

To get around, Kristin experienced the true life of a Dane and bicycled everywhere, including 4 km from the dormitory to campus and back every day. “I never stepped foot in public transport,” she claimed. Everyone speaks fluent English there but as a dog lover Kristin learned one sentence in Danish: Må jeg kæle med din hund?

She found the stay fruitful as she gained an understanding about what research topics she would like to focus on in the future. She also met many great people from abroad with whom she studied together, mostly from China and Latvia.

Danish Technical University is also our partner in DigiBio project to facilitate technology transfer for building an automated high throughput strain and protein engineering platform.

Photo is obtained from Pexels

People
Petri-Jaan Lahtvee was awarded with State medal

Associate professor Petri-Jaan Lahtvee was honoured with White Star Class IV State medal by Estonian president Alar Karis! 🏅

Every year, the President of Estonia gives State medal for people with very special services and devotion. The White Star State medal is awarded to persons in state or local government service, as well as in recognition of services and achievements in the fields of economics, education, science, culture or sports, or other public service.

BioEng lab is honoured to work under his supervision and care.

Huge congratulations! ✨

Photo by Priit Mürk/ERR.

People
Students in bioengineering

Educating the next generation of researchers is important for sustainable science. Several master’s, bachelor’s, and guest students work daily in the bioengineering research group. Where do they come from, and how did they find their way to our lab?

Throughout this year, the bioengineering laboratory is welcoming 16 undergraduate and master’s students from six different countries, mostly from Estonia but also from as far as India, Pakistan, and Egypt, creating a diverse learning environment for the students. Involving students in research activities provides them with essential knowledge about scientific methods and hands-on experience that supplements their studies. Being actively involved, solving actual scientific problems, and seeing results inspires young people to advance further in their studies and explore yet-to-be-known topics.

Moreover, including the younger generation in active research benefits the research group as a whole. Our scientist, Srdjan Gavrilovic, who is supervising five students this year, commented: “Involving students in research is helpful in advancing more labour-intensive parts of research and exploring hypotheses.”

We also asked our visiting students, Sandra and Javeria, about their experience and how they found their way into the bioengineering lab. “We came to TalTech for one semester as part of the Erasmus Mundus scholarship. Petri-Jaan Lahtvee was our lecturer and he had an industrial project coming up with Fibenol, so he offered us this opportunity. We are just pursuing our master’s degrees, and conducting research together with an industrial producer was a wonderful way for us to explore both scopes – how research is conducted in a laboratory and how work is done in the industry. Having this experience allows us to explore both opportunities and decide whether we want to continue with PhD studies or start working in the industry. Our semester is now over, but we will stay until the end of summer and then continue our journeys.”

What an exciting era of life it is to travel and obtain experience within scientific groups internationally!

Open positions
Master’s Thesis Projects (2023 – 2024)

Our lab will accept two master’s thesis students (local/ international/ Erasmus academic exchange) this summer. These thesis projects combine aspects of chemistry, chemical engineering, materials science, and biology to develop engineered living materials for biochemical production. The first project envisions the fabrication of functional living materials, while the second project focuses on the design and application of flow bioreactors.

The thesis projects will require two semesters for completion, starting in the summer of 2023. Therefore, students expecting graduation in the summer of 2024 are welcome to apply. We will consider students having a materials science, chemistry, biology, polymer science, chemical engineering, food technology, biotechnology, or an interdisciplinary background.

More information and how to apply: HERE

People
Students of the MSc. Biological and Chemical Engineering for a Sustainable Bio-economy

Four Erasmus Mundus Students of the MSc. Biological and Chemical Engineering for a Sustainable Bio-economy joined our group until June. Ariyan Amirifar, Belén Fernández de Caleya Ramiro, George William Ssendagala and José Gustavo Varona García will develop a metabolically engineered yeast strain of R. toruloides that will use lignocellulosic biomass (Brewer’s Spent Grain – BSG) as a substrate to produce monoterpenes. The produced terpenes shall be used (instead of hops) during fermentation to produce the distinctive beer flavor. This project will ultimately contribute to circularity in the brewing industry by supporting the valorization of BSG to create a useful product that can in turn be used by the same brewing industry.

People
New students

Two new students have joined the group. Supported by Dora Plus scholarship both PhD students from Brazil, Luísa Czamanski and Julianno Sabedotti De Biaggi, will work 6 and 3 months on R. toruloides, respectively. Luísa will focus on engineering R. toruloides strains capable of producing terpenes, which have a wide range of applications such as precursors of renewable fuels. Julianno will focus on R. toruloides carotenoid metabolism by expressing the enzyme phytoene desaturase from multiple phyla of Fungi in Escherichia coli and analysing its activity on different substrates in vitro.

People
New student
 Artjom Tšitšerin, a high school student at Tallinn Central Russian Gymnasium, has joined our group to curate the carotenoid pathway by investigating whether overexpressing an heterologous xylulokinase in R. Toruloides could improve carotenoid yield.
People
New members at BioEng

From April 1st, we have two new members joining Food Tech and Bioengineering lab.

Srdjan Gavrilovic will be joining as a Research Scientist working on metabolic engineering and the development of synthetic biology tools.

Andreia Axelrud will join us as a Research Engineer while having a strong background in quality control and bioprocess optimization.

 

Welcome to our team!